euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

167 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip2803 chr1 101978984 101978984 - unknown germline . no 230 .
srip3063 chr1 102568917 102568917 + unknown germline . no 230 .
srip3726 chr1 118805682 118805682 - unknown germline . no 230 .
srip5205 chr1 172626211 172626211 + unknown germline . no 230 .
srip5426 chr1 179575369 179575369 - unknown germline . no 230 TDRD5
srip7380 chr1 242311569 242311569 + unknown germline . no 230 PLD5
srip7844 chr10 19211098 19211098 - unknown germline . no 230 .
srip8012 chr10 19216659 19216659 + unknown germline . no 230 .
srip8466 chr10 25707693 25707693 - unknown germline . no 230 GPR158
srip8834 chr10 42797341 42797341 - unknown germline . no 230 .
srip9807 chr10 82972200 82972200 . unknown germline . no 230 .
srip10873 chr10 108935818 108935818 - unknown germline . no 230 .
srip11829 chr10 124455224 124455224 + unknown germline . no 230 .
srip12544 chr11 15380252 15380252 + unknown germline . no 230 .
srip13814 chr11 33670130 33670130 + unknown germline . no 230 C11orf41
srip13988 chr11 40841279 40841279 + unknown germline . no 230 .
srip14243 chr11 41831803 41831803 - unknown germline . no 230 .
srip15000 chr11 50399973 50399973 - unknown germline . no 230 .
srip17181 chr11 94684368 94684368 + unknown germline . no 230 .
srip17666 chr11 104556129 104556129 - unknown germline . no 230 .
srip18233 chr11 112084613 112084613 + unknown germline . no 230 BCO2
srip18272 chr11 114895517 114895517 + unknown germline . no 230 .
srip19261 chr11 134305645 134305645 - unknown germline . no 230 .
srip19879 chr12 11219195 11219195 - unknown germline . no 230 PRH1-PRR4
srip20119 chr12 12933687 12933687 - unknown germline . no 230 APOLD1
srip20744 chr12 28226420 28226420 - unknown germline . no 230 .
srip22237 chr12 43256979 43256979 - unknown germline . no 230 .
srip22830 chr12 48929057 48929057 + unknown germline . no 230 .
srip23978 chr12 79338030 79338030 - unknown germline . no 230 SYT1
srip24634 chr12 84965140 84965140 + unknown germline . no 230 .
srip26381 chr12 126802936 126802936 - unknown germline . no 230 .
srip27121 chr13 25545933 25545933 + unknown germline . no 230 .
srip28585 chr13 61221163 61221163 - unknown germline . no 230 .
srip29077 chr13 61462340 61462340 - unknown germline . no 230 .
srip29228 chr13 61681805 61681805 - unknown germline . no 230 .
srip29868 chr13 65549230 65549230 - unknown germline . no 230 .
srip30329 chr13 72968678 72968678 + unknown germline . no 230 .
srip30984 chr13 79259790 79259790 - unknown germline . no 230 .
srip31567 chr13 85871605 85871605 - unknown germline . no 230 .
srip31983 chr13 86340151 86340151 - unknown germline . no 230 .
srip33524 chr13 104296230 104296230 - unknown germline . no 230 .
srip35210 chr14 28301256 28301256 + unknown germline . no 230 .
srip35888 chr14 36674754 36674754 + unknown germline . no 230 .
srip38135 chr14 71197788 71197788 + unknown germline . no 230 MAP3K9
srip39739 chr15 37707890 37707890 - unknown germline . no 230 .
srip41596 chr15 61328966 61328966 - unknown germline . no 230 RORA
srip41727 chr15 62169645 62169645 - unknown germline . no 230 VPS13C
srip42443 chr15 83551614 83551614 - unknown germline . no 230 HOMER2
srip43249 chr15 100931152 100931152 - unknown germline . no 230 .
srip43445 chr16 3278460 3278460 + unknown germline . no 230 ZNF200
srip45506 chr16 33992437 33992437 . unknown germline . no 230 .
srip46328 chr16 71028016 71028016 + unknown germline . no 230 HYDIN
srip46427 chr16 78751992 78751992 . unknown germline . no 230 WWOX
srip46523 chr17 4314989 4314989 - unknown germline . no 230 .
srip46538 chr17 6341639 6341639 - unknown germline . no 230 .
srip47016 chr17 25303557 25303557 + unknown germline . no 230 .
srip47208 chr17 28398310 28398310 + unknown germline . no 230 EFCAB5
srip48362 chr17 68357404 68357404 + unknown germline . no 230 .
srip48975 chr18 15095255 15095255 - unknown germline . no 230 .
srip50751 chr18 51762737 51762737 - unknown germline . no 230 .
srip51614 chr18 74515281 74515281 - unknown germline . no 230 LOC100131655
srip52429 chr19 45444694 45444694 + unknown germline . no 230 .
srip52754 chr2 6798283 6798283 - unknown germline . no 230 .
srip53484 chr2 23191008 23191008 - unknown germline . no 230 .
srip54264 chr2 36570259 36570259 - unknown germline . no 230 .
srip55008 chr2 59376477 59376477 - unknown germline . no 230 .
srip56214 chr2 82098035 82098035 + unknown germline . no 230 .
srip57736 chr2 129573979 129573979 + unknown germline . no 230 .
srip57795 chr2 132768870 132768870 - unknown germline . no 230 .
srip58234 chr2 141852915 141852915 - unknown germline . no 230 LRP1B
srip58681 chr2 145519510 145519510 + unknown germline . no 230 DKFZp686O1327
srip59204 chr2 147020925 147020925 + unknown germline . no 230 .
srip59262 chr2 150518957 150518957 + unknown germline . no 230 .
srip60149 chr2 178676252 178676252 - unknown germline . no 230 PDE11A
srip60528 chr2 181000547 181000547 + unknown germline . no 230 .
srip61238 chr2 201638076 201638076 + unknown germline . no 230 AOX2P
srip62117 chr2 221503753 221503753 - unknown germline . no 230 .
srip62639 chr2 235519803 235519803 + unknown germline . no 230 .
srip63472 chr20 16479499 16479499 - unknown germline . no 230 KIF16B
srip64021 chr20 25895497 25895497 - unknown germline . no 230 .
srip65254 chr20 59972445 59972445 + unknown germline . no 230 CDH4
srip65426 chr21 11054333 11054333 . unknown germline . no 230 BAGE2
srip65539 chr21 14390189 14390189 - unknown germline . no 230 .
srip65850 chr21 19517305 19517305 - unknown germline . no 230 .
srip66294 chr21 23626198 23626198 - unknown germline . no 230 .
srip67488 chr22 22486374 22486374 - unknown germline . no 230 IGL@
srip67843 chr22 22715595 22715595 + unknown germline . no 230 IGL@
srip68756 chr22 44324597 44324597 - unknown germline . no 230 PNPLA3
srip70728 chr3 24987863 24987863 - unknown germline . no 230 .
srip71906 chr3 38626071 38626071 + unknown germline . no 230 SCN5A
srip72717 chr3 55788574 55788574 + unknown germline . no 230 ERC2
srip73799 chr3 75101217 75101217 + unknown germline . no 230 .
srip75095 chr3 84433396 84433396 + unknown germline . no 230 .
srip75584 chr3 85576556 85576556 + unknown germline . no 230 CADM2
srip77235 chr3 123590719 123590719 + unknown germline . no 230 MYLK
srip78643 chr3 151148549 151148549 - unknown germline . no 230 MED12L
srip80236 chr3 175677977 175677977 - unknown germline . no 230 .
srip80352 chr3 176091325 176091325 + unknown germline . no 230 .
srip81487 chr3 186372132 186372132 + unknown germline . no 230 .
srip82117 chr3 193354172 193354172 - unknown germline . no 230 OPA1
srip82359 chr4 9451067 9451067 . unknown germline . no 230 DEFB131
srip82981 chr4 18162684 18162684 - unknown germline . no 230 .
srip84711 chr4 47007787 47007787 - unknown germline . no 230 .
srip86211 chr4 66413933 66413933 + unknown germline . no 230 EPHA5
srip89959 chr4 112628964 112628964 + unknown germline . no 230 .
srip90712 chr4 118765257 118765257 + unknown germline . no 230 .
srip92192 chr4 134596423 134596423 + unknown germline . no 230 .
srip92806 chr4 138177329 138177329 + unknown germline . no 230 .
srip94640 chr4 174035603 174035603 + unknown germline . no 230 .
srip95383 chr4 190659701 190659701 + unknown germline . no 230 .
srip95448 chr4 190969819 190969819 + unknown germline . no 230 .
srip96072 chr5 8749521 8749521 + unknown germline . no 230 .
srip97017 chr5 23339375 23339375 - unknown germline . no 230 .
srip97228 chr5 26093147 26093147 + unknown germline . no 230 .
srip97738 chr5 33633341 33633341 - unknown germline . no 230 ADAMTS12
srip99511 chr5 68263468 68263468 - unknown germline . no 230 .
srip100725 chr5 89450775 89450775 + unknown germline . no 230 .
srip102780 chr5 115449070 115449070 - unknown germline . no 230 COMMD10
srip103601 chr5 135023720 135023720 . unknown germline . no 230 .
srip104034 chr5 144233458 144233458 - unknown germline . no 230 .
srip104827 chr5 154873932 154873932 - unknown germline . no 230 .
srip106768 chr6 10914842 10914842 - unknown germline . no 230 SYCP2L
srip107506 chr6 13503042 13503042 + unknown germline . no 230 .
srip108718 chr6 46310300 46310300 + unknown germline . no 230 .
srip108982 chr6 57486637 57486637 . unknown germline . no 230 PRIM2
srip109530 chr6 63368201 63368201 + unknown germline . no 230 .
srip111036 chr6 77980645 77980645 - unknown germline . no 230 .
srip112715 chr6 102283765 102283765 - unknown germline . no 230 GRIK2
srip113344 chr6 123853941 123853941 - unknown germline . no 230 TRDN
srip113814 chr6 142450105 142450105 - unknown germline . no 230 .
srip115699 chr6 162181262 162181262 + unknown germline . no 230 PARK2
srip116119 chr7 8019019 8019019 + unknown germline . no 230 GLCCI1
srip116254 chr7 12725156 12725156 + unknown germline . no 230 .
srip116886 chr7 41310792 41310792 - unknown germline . no 230 .
srip117017 chr7 42529869 42529869 - unknown germline . no 230 .
srip118331 chr7 63749896 63749896 + unknown germline . no 230 .
srip119182 chr7 80761424 80761424 . unknown germline . no 230 .
srip119819 chr7 84901724 84901724 - unknown germline . no 230 .
srip120246 chr7 85044744 85044744 + unknown germline . no 230 .
srip121749 chr7 107829256 107829256 + unknown germline . no 230 NRCAM
srip121994 chr7 108325669 108325669 + unknown germline . no 230 .
srip122281 chr7 110484750 110484750 + unknown germline . no 230 IMMP2L
srip122587 chr7 119446561 119446561 - unknown germline . no 230 .
srip123696 chr7 152099707 152099707 . unknown germline . no 230 MLL3
srip124067 chr8 4452901 4452901 - unknown germline . no 230 CSMD1
srip124394 chr8 5829282 5829282 - unknown germline . no 230 .
srip125428 chr8 24926547 24926547 - unknown germline . no 230 .
srip126891 chr8 67381884 67381884 - unknown germline . no 230 .
srip127443 chr8 72399228 72399228 - unknown germline . no 230 .
srip127579 chr8 75723729 75723729 + unknown germline . no 230 .
srip128458 chr8 92186274 92186274 - unknown germline . no 230 LRRC69
srip129137 chr8 115788572 115788572 - unknown germline . no 230 .
srip129661 chr8 119721696 119721696 - unknown germline . no 230 SAMD12-AS1
srip130135 chr8 131041227 131041227 + unknown germline . no 230 .
srip131393 chr9 8344967 8344967 + unknown germline . no 230 PTPRD
srip131658 chr9 10163181 10163181 + unknown germline . no 230 PTPRD
srip133416 chr9 32463891 32463891 - unknown germline . no 230 DDX58
srip133625 chr9 34904794 34904794 - unknown germline . no 230 .
srip133753 chr9 66454899 66454899 . unknown germline . no 230 .
srip133870 chr9 68494259 68494259 . unknown germline . no 230 .
srip134327 chr9 87944715 87944715 + unknown germline . no 230 .
srip137226 chrX 54917144 54917144 + unknown germline . no 230 .
srip140463 chrX 111557754 111557754 - unknown germline . no 230 ZCCHC16
srip140532 chrX 116025286 116025286 + unknown germline . no 230 .
srip140809 chrX 119892837 119892837 - unknown germline . no 230 .
srip141067 chrX 122664864 122664864 - unknown germline . no 230 .
srip141950 chrX 140515250 140515250 - unknown germline . no 230 .